BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006F06SP1|AL425566
(791 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1602 1475 0.0
>3x_Contig1602
Length = 12694
Score = 1475 bits (729), Expect = 0.0
Identities = 765/791 (96%), Gaps = 1/791 (0%)
Strand = Plus / Minus
Query: 1 tgaggtgtagtgtcactctttgatttttcattagtagcmaattttgatagcttttcattt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4514 tgaggtgtagtgtcactctttgatttttcattagtagccaattttgatagcttttcattt 4455
Query: 61 aacttatctaattmaatcgagttagctagttmmmtaggagaaamacttcttttcaaaatt 120
||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 4454 aacttatctaattcaatcgagttagctagttccctaggagaaacacttcttttcaaaatt 4395
Query: 121 ccaacatggtctgagctatggttacgagacattgtcctggccaataagctgggatttgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4394 ccaacatggtctgagctatggttacgagacattgtcctggccaataagctgggatttgtc 4335
Query: 181 cgatatggtggaagttgtctagctgggtgaacagatctagaggcaamtgamataattgtg 240
||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||
Sbjct: 4334 cgatatggtggaagttgtctagctgggtgaacagatctagaggcacctgacatatttgtg 4275
Query: 241 gaggaagagtacggtagattatgtggcaaccgattcgaagactgtcctccactgctggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4274 gaggaagagtacggtagattatgtggcaaccgattcgaagactgtcctccactgctggtt 4215
Query: 301 gttgtkaagctactgctatggctaacactcctggactttccgctggtggcagaggatgga 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4214 gttgtgaagctactgctatggctaacactcctggactttccgctggtggcagaggatgga 4155
Query: 361 gcagtaggtatgattkagtatcttctttcttgatggactaaaccgacctctttaacctta 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4154 gcagtaggtatgattgagtatcttctttcttgatggactaaaccgacctctttaacctta 4095
Query: 421 gttgtattcaagtcagtatgtggtaccttagaaaatgtgtctgtttcttcgttatattca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4094 gttgtattcaagtcagtatgtggtaccttagaaaatgtgtctgtttcttcgttatattca 4035
Query: 481 tatagataccagcttacaccatatggtttgggctccaaacagtacacggaatgtaggggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4034 tatagataccagcttacaccatatggtttgggctccaaacagtacacggaatgtaggggg 3975
Query: 541 acatccaaatttgtaataacgtccttactcaagttcaaaaaataaccaagtaaaactctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3974 acatccaaatttgtaataacgtccttactcaagttcaaaaaataaccaagtaaaactctt 3915
Query: 601 gctaccactcgatgcgtgacgattagaagattatmcgtaattctttctatttctgtaatm 660
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3914 gctaccactcgatgcgtgacgattagaagattatccgtaattctttctatttctgtaatc 3855
Query: 661 amagggmgtaammtgttaataamatmmatataagattmamctccaatgcmaggatatmta 720
| |||| |||| ||||||||| || |||||||||| | ||||||||| ||||||| ||
Sbjct: 3854 acagggcgtaacctgttaataacatccatataagattcacctccaatgccaggatatcta 3795
Query: 721 taccttaacttgtctagaagcctttcttcatattcttcaggagagcgtag-aatatttct 779
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3794 taccttaacttgtctagaagcctttcttcatattcttcaggagagcgtagcaatatttct 3735
Query: 780 tcgtatgtaag 790
|||||||||||
Sbjct: 3734 tcgtatgtaag 3724
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4706
Number of Sequences: 1807
Number of extensions: 4706
Number of successful extensions: 93
Number of sequences better than 1.0e-20: 1
length of query: 791
length of database: 10,358,551
effective HSP length: 16
effective length of query: 775
effective length of database: 10,329,639
effective search space: 8005470225
effective search space used: 8005470225
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.6 bits)